水稻耐盐相关动态QTL的加性和上位性与环境互作分析
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黑龙江省普通本科高等学校青年创新人才培养计划(UNPYSCT2017024)


Dynamic Quantitative Trait Loci (QTLs) with Additive, Epistatic and QTL × Environment Interaction Effects for Salt Tolerance in Rice
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    摘要:

    钠离子(Na+)、钾离子(K+)含量和Na+/K+值是影响水稻耐盐性的关键指标。水稻的耐盐性由数量性状位点(QTL)控制,目前在水稻苗期已经鉴定了大量Na+、K+含量和Na+/K+的QTL,但在田间生长期鉴定的QTL数量较少。该研究以粳稻‘东农425’和‘长白10’杂交衍生的重组自交系(RIL)群体为材料,对田间试验条件下的盐胁迫和对照进行联合分析,在水稻不同发育时期鉴定Na+、K+含量和Na+/K+的发育动态QTL,并采用混合线性模型(MCIM)分析各QTL的加性(A)和上位性(AA)及其与环境的互作效应(QE)。结果表明:(1)盐胁迫条件下,亲本和RIL群体的茎Na+含量(SNC)、茎Na+/K+(SN/K)、叶Na+含量(LNC)和叶Na+/K+(LN/K)在各时期均高于对照,茎K+含量(SKC)和叶K+含量(LKC)均低于对照,对照条件下双亲性状在大多数时期均无显著差异;盐胁迫下两个亲本的多个性状在不同发育时期存在显著差异,其中,SNC和LKC在4个时期差异显著,SN/K和LN/K在3个时期差异显著,SKC和LNC在2个时期差异显著。(2)采用非条件和条件QTL作图方法,共检测到13个加性QTL和11对上位性QTL,其中包括14个非条件QTL和10个条件QTL;而13个加性QTL中有8个,11对上位性QTL中有7个具有环境互作效应。(3)qSKC51在水稻4个发育阶段均被检测到,其在调控水稻耐盐性中发挥着重要作用。SNC、SN/K和LN/K的所有QTL均检测到加性×环境互作效应,2对控制SNC的上位性QTL均检测到上位性×环境互作效应,说明这些性状的QTL对盐环境较为敏感。研究发现,田间生长条件下水稻Na+、K+含量和Na+/K+的QTL表达与发育时期密切相关;水稻田间生长条件下耐盐性的遗传非常复杂,在利用分子标记辅助选择(MAS)培育耐盐水稻新材料应该考虑上位性和环境互作效应。

    Abstract:

    Sodium (Na+), potassium (K+) contents and Na+/K+ ratio are the key indexes that affect the salt tolerance of rice. The salt tolerance of rice is controlled by quantitative trait loci (QTLs). At present, a number of quantitative trait loci for Na+ and K+ contents, as well as the Na+/K+ ratio, have been identified at the seedling stage, but few have been identified at the field growth stage. In this study, using a recombinant inbred line (RIL) population derived from a cross between ‘Dongnong 425’ and ‘Changbai 10’, dynamic QTLs for Na+ content, K+ content and the Na+/K+ ratio were identified by a combined analysis of salt stress and control conditions at different developmental stages during the field growth stage of rice. The additive (A), epistatic (AA), and QTL × environmental interaction effects (QE) of these QTLs were analyzed using a mixed linear model (MCIM). The results show that: (1) under the salt stress condition, the Na+ content of stems (SNC), Na+/K+ ratio of stems (SN/K), Na+ content of leaves (LNC) and Na+/K+ ratio of leaves (LN/K) in parents and RIL population were all higher than those of the control at each stage, while the K+content of stems (SKC) and K+ content of leaves (LKC) were all lower than those of the control. There was no significant difference of traits between parents at most stages under control condition. Under the salt stress, a number of traits of the two parents were significantly different at different development stages, among which SNC and LKC were significantly different at four stages, SN/K and LN/K were significantly different at three stages, and SKC and LNC were significantly different at two stages. (2) In total, 13 additive and 11 epistatic QTLs, including 14 unconditional and 10 conditional QTLs were detected using unconditional and conditional QTL mapping methods. We noted that 8 out of 13 additive QTLs and 7 out of 11 epistatic QTLs had significant QE effects. (3) qSKC51 was detected at four developmental stages, suggesting a key role in regulating the salt tolerance of rice. The additive × QE effect was detected in all QTLs of SNC, SN/K and LN/K, and the epistatic × QE effect was detected in all QTLs controlling SNC, indicating that the QTLs of these traits were more sensitive to salt environment. The present study demonstrates that the expression of QTLs for Na+ content, K+ content and Na+/K+ ratio in rice during the field growth stage was closely related to the developmental stages. The heredity of salt tolerance of rice under field growth condition is very complex. Epistatic and QE effects should be considered in producing new salttolerant rice materials by molecular markerassisted selection (MAS).

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孙 健,尹天娇,王 烁,等.水稻耐盐相关动态QTL的加性和上位性与环境互作分析[J].西北植物学报,2020,40(10):1732-1739

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  • 在线发布日期: 2020-11-13
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