甘薯4-香豆酸辅酶A连接酶基因鉴定和表达分析
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海南省农业科学院粮食作物研究所

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海南省科研院所技术开发专项(KYYS-2018-03)


Identification and expression analysis of 4CL genesinIpomoea batatas
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Supported by Hainan provincial research institutes is specialized in technology development(KYYS-2018-03)

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    摘要:

    4-香豆酸辅酶A连接酶(4-coumarate:CoA ligase, 4CL) 在苯丙烷类代谢途径中具有重要调控作用。本研究利用转录组数据在甘薯中鉴定了11个4CL基因,并将这些基因命名为Ib4CL1-Ib4CL11。序列比对和功能域分析发现这些Ib4CL蛋白均具有典型的4CL结构特征,包含保守的Box I和Box II的结构域。进化和保守基序分析显示Ib4CL1和Ib4CL2属于I类4CL,Ib4CL3属于II类4CL,而Ib4CL4- Ib4CL11属于4CL类似蛋白。表达分析显示,Ib4CL3和Ib4CL10在叶中的表达显著高于茎和块根,与绿原酸的积累正相关;Ib4CL4和Ib4CL8在嫩叶中表达较高,与花青素的积累密切相关,说明Ib4CL3和Ib4CL10及Ib4CL4和Ib4CL8可能参与甘薯绿原酸和花青素的生物合成。研究结果为进一步揭示甘薯4CL基因在苯丙烷类代谢途径中的功能奠定了基础。

    Abstract:

    4-coumarate: CoA ligase (4CL) plays an important regulatory role in the phenylaprapanoid metabolism. In this study, 11 4CL genes named Ib4CL1- Ib4CL11 were identified in Ipomoea batatas based on transcriptome data. The results of sequence alignment and functional domain analysis showed that all Ib4CL had typical 4CL structural feature, containing the conserved Box I and Box II domains. Evolutionary and conserved motif analysis suggested that Ib4CL1 and Ib4CL2 belong to Class I, Ib4CL3 belongs to ClassII, and Ib4CL4- Ib4CL11 belong to 4CL-like proteins.Expression analysis showed that the expression of Ib4CL3 and Ib4CL10 in leaves was significantly higher than that in stems and roots, which were positively related to the accumulation of chlorogenic acid; Ib4CL4 and Ib4CL8 were higher expressed in young leaves, closely related to the accumulation of anthocyanins. Gene expression results showed that that Ib4CL3and Ib4CL10, Ib4CL4 and Ib4CL8 may be involved in the biosynthesis of chlorogenic acid and anthocyanins in sweet potato. The results laid the foundation for further revealing possible function of 4CL genes in phenylaprapanoid metabolism of sweet potato.

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  • 收稿日期:2020-01-02
  • 最后修改日期:2020-03-27
  • 录用日期:2020-03-27
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