菘蓝MYB34基因的克隆及其表达分析
作者:
作者单位:

作者简介:

通讯作者:

中图分类号:

基金项目:

陕西省自然科学基金(2016JQ3007);


Cloning and Expression Analysis of MYB34 Gene from Isatis indigotica Fort.
Author:
Affiliation:

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    该研究以菘蓝新鲜嫩叶为材料,采用RTPCR方法,克隆了菘蓝IiMYB34基因(GenBank登录号为MF373610),并对其进行生物信息学和表达模式分析。结果表明:(1)IiMYB34基因组DNA全长为1 854 bp,包含3个外显子和2个内含子;ORF全长为951 bp,编码316个氨基酸;IiMYB34蛋白二级结构中无规则卷曲和α螺旋所占比例最多,延伸链较少,与其三级结构的预测结果相一致;IiMYB34基因序列还存在2个保守的MYB DNAbinding结构域,属于典型的R2R3MYB蛋白;IiMYB34氨基酸序列与欧洲油菜、甘蓝等植物的亲缘关系较近。(2)qRTPCR分析显示,IiMYB34基因呈组织特异性表达,并在叶中表达量最高;茉莉酸甲酯、水杨酸及葡萄糖均显著诱导该基因的表达,而低温(4 ℃)和机械伤害处理对其表达具有一定的抑制效应。该研究结果为进一步揭示IiMYB34基因的功能奠定了基础。

    Abstract:

    IiMYB34 was cloned (GenBank accession No. MF373610) from tenderleaves of Isatis indigotica with RTPCR method, and its bioinformatics and expression pattern analysis were performed in this study. The results indicated that: (1) the full length gDNA of IiMYB34 was 1 854 bp, including 3 exons and 2 introns; Its ORF was 951 bp in length, encoding 316 amino acid residues; The alpha helix structures and coiled coils were in higher proportions than those of the extension chain structures in the secondary structure of IiMYB34 protein, and the results were consistent with its tertiary structure; The functional structure domain analysis results showed that IiMYB34 protein was a typical R2R3MYB protein with two conserved MYB DNAbinding domains; The characteristic of the amino acid sequences of IiMYB34 was highly homologous with Brassica napus and Brassica oleracea. (2) The qRTPCR analysis results indicated that IiMYB34 exhibited a tissuesspecific expression and was highly expressed in leaf. Moreover, IiMYB34 could be induced significantly by MeJA, SA and Glu, but repressed by low temperature (4 ℃) and mechanical wounding. The obtained results laid the foundations for the further functional research on IiMYB34.

    参考文献
    相似文献
    引证文献
引用本文

陆 苗,李明宵,王 晶,等.菘蓝MYB34基因的克隆及其表达分析[J].西北植物学报,2017,37(11):2139-2145

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2017-12-26
  • 出版日期:

微信公众号二维码

手机版网站二维码