牡丹PoSAD基因克隆与表达分析
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国家自然科学基金(31171588);


Cloning and Expression Analysis of StearoylACP Desaturase Gene PoSAD from Paeonia ostii
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    摘要:

    以凤丹牡丹(Paeonia ostii)叶片为试验材料,采用 RACE 和 RTPCR方法,克隆得到凤丹牡丹硬脂酰ACP 去饱和酶基因 SAD 的cDNA 全长,命名为 PoSAD(GenBank登录号为KY038819)。序列分析表明,该基因 cDNA 序列全长1 559 bp,其中开放阅读框1 197 bp,编码398个氨基酸,3′ 端非编码区长172 bp,5′ 端非编码区长123 bp。多序列比对结果表明,凤丹牡丹 PoSAD 氨基酸序列含有2个保守结构域。系统发育分析结果显示,凤丹牡丹与蓖麻处于同一分支,其亲缘关系最近。 TMHMM 和 TargetP 亚细胞定位分析得知,PoSAD 蛋白无跨膜区域,可能定位于叶绿体中发挥功能。组织特异性结果分析表明,PoSAD 基因在凤丹牡丹的根、茎、叶、花瓣、雌蕊、雄蕊、种子中均有表达,且在花瓣中表达量最高,雌蕊中次之,在根中的表达量最低;不同时期种子中,60 d表达量最高,80 d次之,10 d中表达量最低。

    Abstract:

    The stearoylACP desaturase (SAD) gene from Paeonia ostii was cloned using RTPCR and RACEPCR strategies, named as PoSAD (GenBank accession number: KY038819). The full length of FAD3 cDNA is 1 559 bp, contains a 1 197 bp open reading frame (ORF) encoding a putative protein of 398 amino acids. The noncoding districts of 3′ and 5′ end are 172 bp and 123 bp. Multiple sequence alignment results showed that it contains two conserved domains of PoSAD gene. Phylogenetic tree analysis showed that the P. ostii had the closest evolutionary relationship with Ricinus communis. Subcellular localization analysis of TMHMM and TargetP indicated that it might be targeted to the endoplasmic reticulum without transmembrane region. PoSAD gene was expressed in the root, stem, leaf, petal, pistil, stamen and seed of P. ostii by the tissuespecificity expression. The expressive content of PoSAD gene in different tissues of P. ostii was different: the highest was petal, the next was pistil, and the lowest level was in root; in different periods of seeds, the highest expression was in seeds of 60 d, the next was 80 d. The expression level of 10 d was the lowest.

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廖冰楠,陆俊杏,黄兴琳,等.牡丹PoSAD基因克隆与表达分析[J].西北植物学报,2018,38(1):35-40

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  • 在线发布日期: 2018-02-05
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