茎用莴苣2个WRKYⅢ亚族转录因子基因的克隆与表达
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国家自然科学基金青年项目(32102405);


Cloning and Expression of Two WRKYⅢ Subfamily Transcription Factor Genes from Asparagus Lettuce
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    摘要:

    为了揭示WRKYⅢ亚族转录因子基因在茎用莴苣不同生物学过程中的作用,该研究在茎用莴苣品种‘永安红’中克隆得到了2个WRKYⅢ亚族转录因子基因LsWRKY08和LsWRKY37,并对其进行了序列比对、进化树构建、qRTPCR分析、互作网络及启动子分析,为深入研究茎用莴苣WRKYⅢ亚族转录因子的功能、提高茎用莴苣的产量和品质奠定理论基础。结果表明:(1)LsWRKY08和LsWRKY37转录因子分别含有945和930 bp的开放阅读框,分别编码314和309个氨基酸。(2)qRTPCR分析表明,LsWRKY08基因在叶片中的表达量比在根和茎中的表达量高,其中在茎膨大过程中,其表达量逐渐降低,而在干旱、高温、低温、盐等非生物胁迫中的表达量均比对照提高,且LsWRKY08基因在SA处理中表达量较对照明显增加;LsWRKY37基因在根中的表达量比在叶和茎中高,其在茎膨大过程中的表达模式与LsWRKY08基因不同,LsWRKY37基因在不同非生物胁迫下的表达模式存在差异。(3)互作网络分析发现,LsWRKY08和LsWRKY37可与植物防御相关蛋白以及其他转录因子存在互作;启动子鉴定发现,LsWRKY08和LsWRKY37基因启动子区存在多个顺式作用元件,其中LsWRKY37启动子含有Wbox元件,表明LsWRKY37可能与其他WRKY转录因子之间存在自我调节和交叉调节。研究认为,LsWRKY08和LsWRKY37基因能响应不同非生物胁迫以及激素处理,但2个基因之间表达模式存在差异,推测同一亚族的转录因子基因功能可能存在差异,且LsWRKY08和LsWRKY37转录因子可通过与其他蛋白相互作用或受其他基因调控来参与不同的生物学过程。

    Abstract:

    In order to reveal the roles of asparagus lettuce WRKYⅢ subfamily transcription factors in different biological processes, we cloned two WRKYⅢ subfamily transcription factor genes LsWRKY08 and LsWRKY37 from asparagus lettuce cultivar ‘Yonganhong’ in the study. The sequence alignment, evolutionary tree construction, qRTPCR, interaction network and promoter analysis were carried out. The results will provide a basis for further studying the function of WRKYⅢ transcription factor of asparagus lettuce and improving the yield and quality of asparagus lettuce. The results showed that: (1) LsWRKY08 and LsWRKY37 transcription factors contained 945 bp and 930 bp open reading frames, encoding 314 and 309 amino acid residues, respectively. (2) qRTPCR analysis showed that the expression of LsWRKY08 in leaves was higher than that in roots and stems; in the process of stem expansion, its expression decreased gradually; but compared with control, the expression patterns of LsWRKY08 increased in drought, high/low temperature and salt; the expression of LsWRKY08 increased significantly in SA treatment compared with control. LsWRKY37 showed a higher level of expression in roots than in leaf and stem. Its expression pattern during stem expansion was different to that of LsWRKY08. There were differences in the expression pattern of LsWRKY37 under different abiotic stresses. (3) Interaction network analysis showed that LsWRKY08 and LsWRKY37 could interact with plant defense related proteins and other transcription factors. Promoter analysis showed the promoter regions of LsWRKY08 and LsWRKY37 genes contained multiple cis elements. Wbox element was identified in the promoter region of LsWRKY37, which indicating the selfregulation and crossregulation existed between LsWRKY37 and other WRKY transcription factors. These results showed that LsWRKY08 and LsWRKY37 genes could respond to different abiotic stresses and hormone treatments, but the expression patterns of these two genes were different, which indicating that the function of transcription factor genes belonged to the same subfamily may be different. LsWRKY08 and LsWRKY37 transcription factors could participate in different biological processes through interaction with other proteins or regulation by other genes.

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杜 萍,吴庆莲,伊文一,等.茎用莴苣2个WRKYⅢ亚族转录因子基因的克隆与表达[J].西北植物学报,2022,42(10):1644-1653

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  • 在线发布日期: 2022-11-10
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