地黄GGPPS1基因克隆及表达分析
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国家“十二五”科技支撑计划(2011BAI06B02);


Clone and Expression Analysis of GGPPS1 Gene from Rehmannia glutinosa
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    摘要:

    以地黄为材料,通过分析地黄转录组数据,设计特异性引物,克隆了地黄牻牛儿基牻牛儿基焦磷酸合酶(geranylgeranyl pyrophosphate synthase,GGPPS)基因的cDNA序列,命名为RgGGPPS1,GenBank登录号为KU258808。同时在生物信息学分析的基础上,进行原核表达、纯化以及组织特异性表达分析。结果显示:(1)RgGGPPS1基因开放阅读框为987 bp,编码328个氨基酸。(2)生物信息学分析结果显示,RgGGPPS1蛋白含有2个富含天冬氨酸的基序(DDXXXXDD和DDXXD),与芝麻等双子叶植物中的GGPPS蛋白相似性较高。(3)利用构建的原核表达载体pET32aRgGGPPS1在大肠杆菌BL21(DE3)菌株中成功表达RgGGPPS1重组蛋白,采用Ni2+亲和层析得到了纯化的RgGGPPS1重组蛋白。(4)荧光定量PCR结果显示,RgGGPPS1基因在根中表达量最高,叶、茎中表达量较低。研究结果为进一步研究RgGGPPS1基因在地黄环烯醚萜苷生物合成途径中的功能奠定了基础。

    Abstract:

    Rehmannia glutinosa was used as experimental material in this study. Through analyzing the transcriptome data of R. glutinosa and designing specific primers, we isolated the cDNA sequence of geranylgeranyl pyrophosphate synthase (GGPPS) from R. glutinosa and named as RgGGPPS1 (GenBank accession No. KU258808). Meanwhile, on the basis of bioinformatic analysis, we performed the prokaryotic expression, purification and tissuespecific expression analysis. The results indicated that: (1) RgGGPPS1 has an open reading frame (ORF) of 987 bp, which encoded a protein of 328 amino acid residues. (2) Bioinformatic analysis indicated that RgGGPPS1 protein contains the two conserved motifs (DDXXXXDD) and (DDXXD); RgGGPPS1 protein showed the highest homology, 92% identity, with GGPPS protein from Sesamum indicum. (3) By utilizing the construction of prokaryotic expression vector pET32aRgGGPPS1, we successfully expressed the recombinant RgGGPPS1 protein in E. coli BL21 (DE3) cells. Furthermore, the recombinant RgGGPPS1 protein was purified through Ni2+ affinity chromatography. (4) Realtime PCR analysis indicated that RgGGPPS1 was expressed in high transcript level in roots, low levels in leaves and stems. The results of this study provided the fundamental information about RgGGPPS1 gene for followup research of its function involved in iridoid glycoside biosynthesis pathway.

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赵 乐,史晶晶,马利刚,等.地黄GGPPS1基因克隆及表达分析[J].西北植物学报,2016,36(5):888-895

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  • 在线发布日期: 2016-06-16
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