慈竹中2个NAC转录因子的克隆与分析
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国家自然科学基金(31400257,31400333);


Cloning and Analysis of Two NAC Transcription Factor Genes in Bambusa emeiensis
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    摘要:

    基于慈竹转录组数据库,从慈竹笋克隆得到2个NAC基因,分别命名为BeNAC3(GenBank登录号KU821587)和BeNAC4(GenBank登录号 KU821588),在生物信息学分析的基础上,研究了2个基因的组织表达模式和转录活性。TMHMM软件和系统进化分析表明,BeNAC3和BeNAC4都有一个明显的跨膜结构域,可能是膜结合蛋白,且两者分别与NAC2亚家族和ANAC011亚家族有较高相似性。根据BeNAC3在笋、未展开叶、展开叶和茎中的相对表达量,及其在进化树中与NAC2亚家族近似的亲缘关系,推测其可能与激素合成调控及开花有关;而 BeNAC4基因在成熟组织中表达量明显高于幼嫩的笋和未展开叶,表明其可能参与慈竹的次生生长发育调控。酵母单杂活性实验分析表明,BeNAC3和BeNAC4都能够激活β半乳糖苷酶基因(lacZ)的表达,表明这2个基因均具有一定的转录活性。该研究结果为今后获得转基因慈竹植株功能的验证奠定了一定的基础。

    Abstract:

    In this paper, two NAC genes were cloned from the shoots of Bambusa emeiensis, based on the transcriptome database of B. emeiensis. They were named BeNAC3 and BeNAC4. Their registration number were KU821587 and KU821588 in GenBank, respectively. The tissue expression and transcriptional activity of BeNAC3 and BeNAC4 were studied on the basis of bioinformatics analysis. The results shown that both genes have an obvious transmembrane domain, which could be a kind of membrane binding protein, based on the analysis of TMHMM and phylogenetic. Also, they are highly homologous to the NAC2 subfamily and the ANAC011 subfamily, respectively. Moreover, there is a speculation that BeNAC3 might be related to the regulation of hormone synthesis and flowering according to its relative expression in bamboo shoots, unexpanded leaves, expanded leaves and stems, and its relationship with the NAC2 subfamily in evolutionary trees. As for BeNAC4, it might be involved in the secondary metabolism, for its expression in mature tissues was significantly higher than that in young shoots and unexpanded leaves. The experiments of single hybrid transcription activity in yeast indicated that both BeNAC3 and BeNAC4 could activate the expression of the βGAL gene (lacZ), which indicated that both of them have a particular transcriptional activity. The research results lay a foundation for the future functional verification of transgenic plants from B. emeiensis.

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李会萍,黎帮勇,等.慈竹中2个NAC转录因子的克隆与分析[J].西北植物学报,2017,37(2):225-231

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  • 在线发布日期: 2017-03-23
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