白桦Trihelix家族全基因组鉴定及抗病表达模式分析
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国家自然科学基金(31800558);


Genome Identification and Diseaseresistant Expression Pattern Analysis of Trihelix Family of Betula platyphylla
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    摘要:

    Trihelix家族是植物中特有的一类转录因子家族,在植物生长发育、抗逆反应中具有重要的调控作用。该研究基于白桦基因组数据库,对白桦Trihelix家族基因的表达特性以及抗病功能等进行分析,为Trihelix家族成员在白桦抗病过程中的功能研究奠定基础。结果显示:(1)共筛选到白桦8个Trihelix家族成员(BpTrihelix1~BpTrihelix8),分布在6条染色体上;氨基酸分子量在35 633.96~81 871.27 Da之间,等电点在5.32~8.67之间,均为疏水性氨基酸。(2)组织特异性表达分析表明,8个家族成员在白桦根、茎、叶中均有不同程度的表达,且BpTrihelix3在根、茎、叶中的表达量均最高。(3)病原菌侵染试验结果发现,链格孢霉菌(Alternaria alternata)感染白桦植株叶片48 h和立枯丝核菌(Rhizoctonia solani)感染白桦幼苗根部24 h时,BpTrihelix3、BpTrihelix4和BpTrihelix7均显著上调,其余家族基因表达量无明显变化,说明该家族基因成员中的BpTrihelix3、BpTrihelix4和BpTrihelix7响应了病原菌的感染,推测三者在白桦抗病过程中可能发挥重要作用。

    Abstract:

    The Trihelix family is a specific family of transcription factors in plants, and plays an important regulatory role in plant growth, development, and stress resistance. Based on the genome database of birch, this study analyzed the expression characteristics and disease resistance function of birch Trihelix family genes, which laid the foundation for the research on the function of Trihelix family members in the disease resistance process of birch. The results showed that: (1) a total of 8 Trihelix family members (BpTrihelix1-BpTrihelix8) were distributed on 6 chromosomes; the molecular weight of amino acids is between 35 633.96-81 871.27 Da, and the isoelectric point is 5.32-8.67, all of which are hydrophobic amino acids. (2) Tissuespecific expression analysis showed that eight family members are expressed in different degrees in the roots, stems, and leaves of birch, and BpTrihelix3 have the highest expression level in roots, stems, and leaves. (3) The results of the pathogen infection test showed that BpTrihelix3, BpTrihelix4 and BpTrihelix7 were significantly upregulated when Alternaria alternata infected the leaves of birch for 48 h and Rhizoctonia solani infected roots of birch seedlings for 24 h, and the expression level of the rest of the family genes did not change significantly, indicating that among the gene members of this family, BpTrihelix3, BpTrihelix4 and BpTrihelix7 responded to the infection of pathogenic bacteria, so we speculated that they might play an important role in the disease resistance procress of birch.

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宁小萌,孙晶晶,冯思雨,等.白桦Trihelix家族全基因组鉴定及抗病表达模式分析[J].西北植物学报,2022,42(6):920-929

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  • 在线发布日期: 2022-07-15
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